This directory contains the data files required as input to the
liftOver utility. This tool -- which requires a Linux platform --
allows the mass conversion of coordinates from one assembly to
another. The executable file for the utility can be downloaded from
http://hgdownload.cse.ucsc.edu/admin/exe/

The file names reflect the assembly conversion data contained within
in the format <db1>To<Db2>.over.chain.gz. For example, a file named
hg15ToHg16.over.chain.gz file contains the liftOver data needed to
convert hg15 (Human Build 33) coordinates to hg16 (Human Build 34).
If no file is available for the assembly in which you're interested,
please send a request to the genome mailing list
(genome@soe.ucsc.edu) and we will attempt to provide you with one.

To download a large file or multiple files from this directory, we recommend 
that you use ftp rather than downloading the files via our website. To do so: 
    ftp hgdownload.cse.ucsc.edu 
    user name: anonymous
    password: <your email address>
    go to the directory goldenPath/dm3/liftOver

To download multiple files from the UNIX command line, use the "mget" command. 
    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 
Use the "prompt" command to toggle the interactive mode if you do not want 
to be prompted for each file that you download.

-------------------------------------------------------
Please refer to the credits page
(http://genome.ucsc.edu/goldenPath/credits.html) for guidelines and
restrictions regarding data use for these assemblies.

[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[TXT]README.txt01-Dec-2008 12:18 1.5K 
[   ]dm3ToAnoGam1.over.chain.gz05-Dec-2006 16:26 2.5M 
[   ]dm3ToApiMel3.over.chain.gz11-Dec-2006 08:45 2.3M 
[   ]dm3ToDm2.over.chain.gz11-Jun-2008 14:29 1.2M 
[   ]dm3ToDm6.over.chain.gz28-Aug-2014 14:29 1.8M 
[   ]dm3ToDp3.over.chain.gz14-Aug-2006 17:14 7.4M 
[   ]dm3ToDp4.over.chain.gz04-Dec-2006 16:35 7.5M 
[   ]dm3ToDroAna2.over.chain.gz22-Aug-2006 14:48 8.8M 
[   ]dm3ToDroAna3.over.chain.gz04-Dec-2006 13:23 8.4M 
[   ]dm3ToDroEre1.over.chain.gz22-Aug-2006 20:27 6.6M 
[   ]dm3ToDroEre2.over.chain.gz30-Nov-2006 05:38 6.2M 
[   ]dm3ToDroGri2.over.chain.gz30-Nov-2006 21:18 6.7M 
[   ]dm3ToDroMoj3.over.chain.gz04-Dec-2006 12:51 6.9M 
[   ]dm3ToDroPer1.over.chain.gz20-Nov-2006 13:27 7.8M 
[   ]dm3ToDroSec1.over.chain.gz29-Nov-2006 12:12 5.1M 
[   ]dm3ToDroSim1.over.chain.gz14-Nov-2006 12:50 5.0M 
[   ]dm3ToDroSim2.over.chain.gz01-Nov-2016 17:02 3.1M 
[   ]dm3ToDroVir2.over.chain.gz02-Mar-2012 09:01 5.7M 
[   ]dm3ToDroVir3.over.chain.gz04-Dec-2006 15:07 7.5M 
[   ]dm3ToDroWil1.over.chain.gz04-Dec-2006 11:26 8.3M 
[   ]dm3ToDroYak2.over.chain.gz15-Nov-2006 08:17 6.3M 
[   ]dm3ToTriCas2.over.chain.gz11-Dec-2006 09:23 3.2M 
[TXT]md5sum.txt01-Nov-2016 17:07 1.2K 

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