This directory contains the Feb. 2007 assembly of the P. pacificus genome
(priPac1, Washington University School of Medicine GSC
	Pristionchus pacificus 5.0)
in one gzip-compressed FASTA file per chromosome.

This assembly was produced by the Genome Sequencing Center at the
Washington University School of Medicine in St. Louis.
For more information on the P. pacificus genome, see the project website:
http://genome.wustl.edu/genome.cgi?GENOME=Pristionchus+pacificus+var.+california

Files included in this directory:

  - chr*.fa.gz: compressed FASTA sequence of each chromosome.

    Repeats from RepeatMasker and Tandem Repeats Finder (with period
    of 12 or less) are shown in lower case; non-repeating sequence is
    shown in upper case.

    RepeatMasker was run with the -s (sensitive) setting.
    October 6 2006 (open-3-1-6) version of RepeatMasker
    RepBase RELEASE 20061006

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If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then 
go to the directory goldenPath/priPac1/chromosomes. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory)

The P. pacificus sequence is made freely available to the community by the
Genome Sequencing Center, Washington University School of Medicine, with
the following understanding:

1. The data may be freely downloaded, used in analyses, and repackaged in
   databases.

2. Users are free to use the data in scientific papers analyzing these data
   if the providers of these data are properly acknowledged.  See
   http://genome.ucsc.edu/goldenPath/credits.html for credit information.

3. See also: http://genome.wustl.edu/data.cgi

4. Any redistribution of the data should carry this notice.
[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[TXT]README.txt06-Apr-2010 12:49 1.9K 
[   ]chrUn.fa.gz01-May-2007 10:32 45M 
[TXT]md5sum.txt01-May-2007 10:34 46  

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