This directory contains the data files required as input to 
the liftOver utility. This tool -- which requires a Linux 
platform -- allows the mass conversion of coordinates from 
one assembly to another. The executable file for the utility can 
be downloaded from http://hgdownload.cse.ucsc.edu/admin/exe/

The file names reflect the assembly conversion data contained within
in the format <db1>To<db2>.over.chain.gz. For example, a file named 
hg15Tohg16.zip file contains the liftOver data needed to convert hg15 
(Human Build 33) coordinates to hg16 (Human Build 34). If no file is 
available for the assembly in which you're interested, please send a 
request to the genome mailing list (genome@soe.ucsc.edu) and we will 
attempt to provide you with one.

To download a large file or multiple files from this directory, 
we recommend that you use ftp rather than downloading the files via our 
website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the 
appropriate goldenPath/<assembly>/liftOver directory. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory)

-------------------------------------------------------
Please refer to the credits page 
(http://genome.ucsc.edu/goldenPath/credits.html) for guidelines and
restrictions regarding data use for these assemblies. 


[ICO]NameLast modifiedSizeDescription

[DIR]Parent Directory  -  
[TXT]README.txt01-Dec-2008 12:47 1.4K 
[TXT]md5sum.txt01-Mar-2016 12:41 2.0K 
[   ]rn4ToAilMel1.over.chain.gz04-Feb-2010 19:00 52M 
[   ]rn4ToBosTau2.over.chain.gz24-Mar-2006 13:52 52M 
[   ]rn4ToBosTau3.over.chain.gz26-Mar-2007 10:06 50M 
[   ]rn4ToBosTau4.over.chain.gz21-Jan-2010 15:30 50M 
[   ]rn4ToBosTau6.over.chain.gz31-May-2011 17:14 50M 
[   ]rn4ToBosTau7.over.chain.gz24-Jan-2012 18:48 50M 
[   ]rn4ToCanFam2.over.chain.gz24-Feb-2006 20:12 63M 
[   ]rn4ToCanFam3.over.chain.gz25-Sep-2015 20:29 56M 
[   ]rn4ToCavPor3.over.chain.gz14-Apr-2008 21:14 56M 
[   ]rn4ToDanRer3.over.chain.gz03-Mar-2006 14:07 4.1M 
[   ]rn4ToDanRer4.over.chain.gz19-Jun-2006 21:58 6.1M 
[   ]rn4ToEquCab1.over.chain.gz20-Feb-2007 09:09 64M 
[   ]rn4ToGalGal2.over.chain.gz14-Feb-2006 11:27 5.9M 
[   ]rn4ToGalGal3.over.chain.gz25-May-2006 09:10 5.4M 
[   ]rn4ToGalGal4.over.chain.gz25-Sep-2015 19:25 6.9M 
[   ]rn4ToHg17.over.chain.gz10-Feb-2006 15:32 70M 
[   ]rn4ToHg18.over.chain.gz24-Feb-2006 08:19 70M 
[   ]rn4ToHg19.over.chain.gz02-Jun-2009 11:31 70M 
[   ]rn4ToHg38.over.chain.gz09-May-2014 12:40 65M 
[   ]rn4ToMelGal1.over.chain.gz04-Apr-2011 13:00 4.4M 
[   ]rn4ToMm7.over.chain.gz24-Feb-2006 00:52 72M 
[   ]rn4ToMm8.over.chain.gz20-Feb-2006 13:40 72M 
[   ]rn4ToMm9.over.chain.gz11-Sep-2007 14:59 58M 
[   ]rn4ToMm10.over.chain.gz08-Mar-2012 15:29 53M 
[   ]rn4ToMonDom4.over.chain.gz24-Mar-2006 02:00 15M 
[   ]rn4ToPanTro2.over.chain.gz27-Mar-2006 17:42 69M 
[   ]rn4ToPanTro3.over.chain.gz17-Mar-2011 14:35 64M 
[   ]rn4ToRheMac2.over.chain.gz23-Mar-2006 02:53 71M 
[   ]rn4ToRheMac3.over.chain.gz21-Mar-2012 00:10 63M 
[   ]rn4ToRn3.over.chain.gz12-Feb-2007 10:50 185K 
[   ]rn4ToRn5.over.chain.gz24-Jul-2012 15:55 18M 
[   ]rn4ToRn6.over.chain.gz26-Feb-2016 20:02 10M 
[   ]rn4ToXenTro1.over.chain.gz20-Mar-2006 19:34 4.6M 
[   ]rn4ToXenTro2.over.chain.gz19-Apr-2006 18:58 5.3M 
[   ]rn4ToXenTro3.over.chain.gz22-Sep-2011 19:46 5.1M 

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